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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs10935120 1 rs6763088 chr3:134254989 ANAPC13 chr3:134196547-134204865:- -0.59 -8.13 1.58E-12 Height
THYM cis rs10935120 1 rs6763088 chr3:134254989 CEP63 chr3:134204575-134293852:+ -0.41 -5.87 6.33E-8 Height
THYM cis rs10935120 1 rs6763093 chr3:134254995 ANAPC13 chr3:134196547-134204865:- -0.59 -8.13 1.58E-12 Height
THYM cis rs10935120 1 rs6763093 chr3:134254995 CEP63 chr3:134204575-134293852:+ -0.41 -5.87 6.33E-8 Height
THYM cis rs9815354 1 rs6763829 chr3:41897046 ULK4 chr3:41288091-42003660:- 1.02 11.47 1.22E-19 Diastolic blood pressure
THYM cis rs10935120 1 rs6765505 chr3:134208132 ANAPC13 chr3:134196547-134204865:- 0.58 7.95 3.88E-12 Height
THYM cis rs10935120 1 rs6765505 chr3:134208132 CEP63 chr3:134204575-134293852:+ 0.42 6.15 1.86E-8 Height
THYM cis rs10935120 1 rs6766818 chr3:134226159 ANAPC13 chr3:134196547-134204865:- 0.58 8.05 2.33E-12 Height
THYM cis rs10935120 1 rs6766818 chr3:134226159 CEP63 chr3:134204575-134293852:+ 0.4 5.81 8.19E-8 Height
THYM cis rs10935120 1 rs6766897 chr3:134191303 ANAPC13 chr3:134196547-134204865:- 0.57 7.6 2.06E-11 Height
THYM cis rs10935120 1 rs6766897 chr3:134191303 CEP63 chr3:134204575-134293852:+ 0.41 5.87 6.43E-8 Height
THYM cis rs9815354 1 rs6768128 chr3:41865080 ULK4 chr3:41288091-42003660:- 1 10.81 3.16E-18 Diastolic blood pressure
THYM cis rs9815354 1 rs6768542 chr3:41865474 ULK4 chr3:41288091-42003660:- 1 10.81 3.16E-18 Diastolic blood pressure
THYM cis rs9815354 1 rs6768563 chr3:41865541 ULK4 chr3:41288091-42003660:- 1 10.7 5.29E-18 Diastolic blood pressure
THYM cis rs10935120 1 rs6769885 chr3:134286913 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height